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tfPatterns
is a standalone java tool, which is now behind the
Tfsitescan Sites analysis service.
It can also be customized or used in pipelines for high-throughput Tfsites analyses across a
library of sequences.
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IGBA-AMI-1 is an Amazon AMI, with 700+ Bioconductor packages for genomics, gene expression, and cancer datasets analysis. The AMI has capabilities for running an R server and includes a postgres server, running in Ubuntu 18.04. Services to facilitate implementation, or customization of this AMI for high-throughput analyses are also available through AWS marketplace. |